DRSC/TRiP Functional Genomics Resources

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Protein Alignment sotv and Extl3

DIOPT Version :10

Sequence 1:NP_725536.1 Gene:sotv / 3772101 FlyBaseID:FBgn0029175 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_064482.1 Gene:Extl3 / 56819 RGDID:62065 Length:919 Species:Rattus norvegicus


Alignment Length:783 Identity:228/783 - (29%)
Similarity:350/783 - (44%) Gaps:200/783 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 CTFWDCLNIYKCE-HDRLKVYIYPLQEFVDEQSDKTATTLSSEYFQILEAVLKSR-YYTSNPNEA 154
            |...:|.:..:|. .....|::|...:|.      ..:.|.....|..:|.:::. |.|.|...|
  Rat   177 CRLHNCFDYSRCPLTSGFPVFVYDSDQFA------FGSYLDPLVKQAFQATVRANVYVTENAAIA 235

  Fly   155 CLF------------LPSLDLLNQNVFDKHLAGAALASLDFW-DRGANHIIFNMLPGGAPSYNTV 206
            ||:            |...||..|           |.||..| ..|.||:|.| |...:.:.|.:
  Rat   236 CLYVVLVGEIQEPAVLQPADLEKQ-----------LHSLPHWRTDGHNHVIIN-LSRKSDTQNLL 288

  Fly   207 LDVNTDNAIIFGGGFDSWSYRPGFDVAIPVWSPRLVRQHAHATAQRKFLLVVAQLNIL------- 264
            .:|:|..|::....|.:..||.|||:.:   ||.:     ||.::..|:.:..|:.:.       
  Rat   289 YNVSTGRAMVAQSTFYAAQYRAGFDLVV---SPLV-----HAMSEPNFMEIPPQVPVKRKYLFTF 345

  Fly   265 -------------------------------PRFVRTLRELSLAHSEQLLLLGACENL---DLTM 295
                                           .|.:.||:.:..:..:|:|:...|:|.   .|..
  Rat   346 QGEKIESLRSSLQEARSFEEEMEGDPPADYDDRIIATLKAVQDSKLDQVLVEFTCKNQPKPSLPT 410

  Fly   296 RCPL-SQHHKSLEYPRLLSRGKFCLLGRSLRMGQPDLV----------EIMSQHCIPVIAVDNYV 349
            ...| .:....||   ||....|.|:   :..|.|.|:          |.:....:||:..:...
  Rat   411 EWALCGEREDRLE---LLKLSTFALI---ITPGDPSLLISSGCATRLFEALEVGAVPVVLGEQVQ 469

  Fly   350 LPFEDVIDWSLASVRI---RENELHSVMQKLKAISSVKIVEMQKQVQWLFSKYFKDLKTVTLTAL 411
            ||:.|::.|:.|::.:   |..|:|.:   |:::|...::.|::|.::|:..||....::..|.|
  Rat   470 LPYHDMLQWNEAALVVPKPRVTEVHFL---LRSLSDSDLLAMRRQGRFLWETYFSTADSIFNTVL 531

  Fly   412 EVLESRI----FPLRA--------RSS-------------------------------------- 426
            .::.:||    .|:|.        ||.                                      
  Rat   532 AMIRTRIQIPAAPIREEVAAEIPHRSGKAAGTDPNMADNGDLDLGPVETEPPYASPKYLRNFTLT 596

  Fly   427 -----RQWNT----IDTNARSTFNPLFLPSLAP------------------------------KS 452
                 |.||:    ......:.|:|: |||.|.                              :.
  Rat   597 VTDCYRSWNSAPGPFHLFPHTPFDPV-LPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVQR 660

  Fly   453 QGFTAVILTYDRVESLFLLIQKLAVVPSLQSILVIWNNQKKSPPHLSTFPSISKPLKIRQTKENK 517
            :.||.|:|||:|.|.|...:::|..:|.|..::|:||: .|.|.....:|.|..|:.:.:|::|.
  Rat   661 EQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNS-PKLPSEDLLWPDIGVPIMVVRTEKNS 724

  Fly   518 LSNRFYPYPEIETEAILTIDDDIIMLTTDELDFGYEVWREFPDHIVGFPSRIHVWENVTMRWHYE 582
            |:|||.|:.||||||||:|||| ..|..||:.||:.||||..|.|||||.|.|.|:.....|.|.
  Rat   725 LNNRFLPWNEIETEAILSIDDD-AHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDIPHQSWLYN 788

  Fly   583 SEWTNQISMVLTGAAFHHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPPIKVTP 647
            |.::.::|||||||||.|||::::|::.||..|:|.|||::|||||||||||::||..||||||.
  Rat   789 SNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHITRKPPIKVTS 853

  Fly   648 RKKFKCPECTNTEMLSADLNHMRERSACIDRFSKIYGRMPLRTVEFRADPVLFRDNFP-DKLKRY 711
            |..|:||.|  .:.||.|.:|..||..||:.|.|:||.|||...:||.|.|||:...| ||.|.:
  Rat   854 RWTFRCPGC--PQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLFKTRLPHDKTKCF 916

  Fly   712 NDI 714
            ..|
  Rat   917 KFI 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sotvNP_725536.1 Exostosin 106..380 CDD:397245 72/342 (21%)
Glyco_transf_64 455..696 CDD:430488 121/240 (50%)
Extl3NP_064482.1 TPR_MLP1_2 <71..150 CDD:462316
Exostosin 190..500 CDD:397245 72/344 (21%)
Glyco_transf_64 663..900 CDD:430488 121/240 (50%)
Blue background indicates that the domain is not in the aligned region.

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