DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3906 and CG4409

DIOPT Version :10

Sequence 1:NP_611802.1 Gene:CG3906 / 37721 FlyBaseID:FBgn0034871 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001097337.1 Gene:CG4409 / 36840 FlyBaseID:FBgn0034128 Length:276 Species:Drosophila melanogaster


Alignment Length:210 Identity:41/210 - (19%)
Similarity:83/210 - (39%) Gaps:29/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SEESEEWCPPENNNTDN------NNPNRTDHDSALCANFQHIRAMINQEALLNLIEVHYNCDLKF 88
            ||||:|  ..:.|.:|:      ..|:..::...|.|    ..|:|..:.:.::...:|:.|.:|
  Fly    50 SEESDE--SDQGNASDDLIFLSRQKPSPVNNSVDLSA----FVALIPLQEVQSIAAHYYHHDAEF 108

  Fly    89 RRAMRYYNTAGFERTTQQLTDTDAYKTVLKELQSESVDTADI-ETVADIFHCIIL---PVRQPDR 149
            :|:..:..::.|....:::............|.:..:|...: .:||.:|...||   .|.:|.:
  Fly   109 QRSYAFLASSDFADIKRKILQLPEVLEFTNYLGNNGLDVVKVMHSVAGVFKPSILSSAAVNEPTK 173

  Fly   150 NCDCK---------AVKHHTFVGDLLSIMPKQEVHNYVAQSQANHTNFGNFTKAVVSKQFQATLK 205
            ....:         ....|..|..:|.|:|:.:::........::..|..|..::.|.:|...|.
  Fly   174 VTTTEDGSSAAGEAQTGLHGMVERVLEILPQDQLYALFFDEFESNKQFAAFVDSISSPKFAKILS 238

  Fly   206 ANINKRDVVKPLRTL 220
            ...|.    .|||.|
  Fly   239 GLQNS----MPLRNL 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3906NP_611802.1 Ins_allergen_rp 58..231 CDD:462003 33/176 (19%)
CG4409NP_001097337.1 Ins_allergen_rp 81..264 CDD:462003 33/177 (19%)

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