DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3906 and jtb

DIOPT Version :10

Sequence 1:NP_611802.1 Gene:CG3906 / 37721 FlyBaseID:FBgn0034871 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_611126.1 Gene:jtb / 36838 FlyBaseID:FBgn0034126 Length:233 Species:Drosophila melanogaster


Alignment Length:420 Identity:84/420 - (20%)
Similarity:125/420 - (29%) Gaps:186/420 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FLGSVLAASNEGESCAYGNEPG-ICQGYNL---------CRPLLEKSRIV-----KIC------G 64
            :|..:|...:.||........| |.|.|.:         ||.|.::.:::     .||      |
  Fly    32 YLNVILVVGSNGEVKLLDVNSGVILQSYRISGTDLNTVRCRYLPQQDKMLIWNGRNICMRGDYNG 96

  Fly    65 YTSQQAVVCCPL---DYRERLQQL--------------------------NDPNQRCRDYQSASN 100
            ......::..|:   |.|.||:.|                          |:..|:..:.|:.|.
  Fly    97 VLLLDTILQAPVTSTDDRVRLELLLSEALLFLQCLQNLEEHGLENMSDVTNELTQKIGEAQAHSK 161

  Fly   101 SG------------LLFGSLAVGSSVVKLKPRAQCPTDQNL---------------IVGGT---- 134
            .|            |...||.:.:|.|.::.|.   .||::               ::.|.    
  Fly   162 RGIKAQKWETVCLELPHSSLRMVASGVVMQLRR---LDQHIPAMAIASAINERLTDLLRGARVTE 223

  Fly   135 -------------AAR---FGEFPHM-ARLAMPD------------ENG----AMVFRCGATLI- 165
                         |||   |..:||| .:..:||            |||    ||.|.|...|: 
  Fly   224 SAKSVQRFQMYSEAARRQTFEAWPHMDYKWVLPDQMAQAGFYHQPGENGNKDRAMCFTCTVCLVC 288

  Fly   166 ----SEQWVMTAAHCLE--------------------SQTIVVRLGELKEGNDE-----FGDP-- 199
                .|.|.....|..|                    |..|......|....|.     .|:|  
  Fly   289 WEKTDEPWSEHERHSPECPFVKGEFTQNVPLSVTYATSPAIATGGFSLISSGDRGVVFCTGNPSG 353

  Fly   200 ------VDVQVTRI----VK-HPN------YKPRTVYNDIALLKLA------------RPVTFSM 235
                  ::.|:|::    || ||:      ..|....|.|.|..||            .|...|:
  Fly   354 DVTVWNIERQLTKVHEFQVKLHPDILTTTTISPTATVNSIELSALAAYFVRTPPGMILMPRRASL 418

  Fly   236 RIRPACLYGSSTVDRTKAVA-IGFGSTEAY 264
            .::|..|       .||.|| :...|||.:
  Fly   419 SLKPKML-------GTKIVAGVRVNSTEPF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3906NP_611802.1 Ins_allergen_rp 58..231 CDD:462003 62/337 (18%)
jtbNP_611126.1 Ins_allergen_rp 33..219 CDD:462003 33/188 (18%)

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