DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33900 and AT1G08170

DIOPT Version :10

Sequence 1:NP_001027305.1 Gene:His2B:CG33900 / 3772094 FlyBaseID:FBgn0053900 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_172295.1 Gene:AT1G08170 / 837338 AraportID:AT1G08170 Length:243 Species:Arabidopsis thaliana


Alignment Length:126 Identity:68/126 - (53%)
Similarity:92/126 - (73%) Gaps:8/126 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPKT----SGKAAKKAGKAQKNITKTDKKKKRKRK----ESYAIYIYKVLKQVHPDTGISSKAMS 58
            ||:|    |....||..|.:|......||||:||.    :.|..|:|||:||||||.||:||||:
plant   110 PPETPASKSEGTLKKTDKVEKKQENKKKKKKKKRDDLAGDEYRRYVYKVMKQVHPDLGITSKAMT 174

  Fly    59 IMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKY 119
            ::|.|:.|:|||||.||:||:.|.||.|::||||:.||||:|||||::|||:||:|||:.:
plant   175 VVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGSKAVSNF 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33900NP_001027305.1 HFD_H2B 33..120 CDD:467035 54/87 (62%)
AT1G08170NP_172295.1 rne <24..124 CDD:236766 4/13 (31%)
HFD_H2B 151..235 CDD:467035 54/83 (65%)

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