DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33837 and hil-1

DIOPT Version :10

Sequence 1:NP_001027339.1 Gene:His1:CG33837 / 3772077 FlyBaseID:FBgn0053837 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_506680.1 Gene:hil-1 / 179993 WormBaseID:WBGene00001852 Length:232 Species:Caenorhabditis elegans


Alignment Length:201 Identity:57/201 - (28%)
Similarity:93/201 - (46%) Gaps:23/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HPPTQQMVDASIKNLKERGGSSLLAIKKYITATYKC--DAQKLAPFIKKYLKSAVVNGKLIQTKG 108
            ||....|:..:|:.:....|||..||.|||...|..  :..|:...::..||.||.:|.:.||:|
 Worm    37 HPSYMDMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQTRG 101

  Fly   109 KGASGSFKLSASAKK--EKDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPK---- 167
            .||:|||::....:|  :.....::|.:...|:|:.|.....|...:...|:..:.:||.|    
 Worm   102 HGATGSFRMGKECEKNLQVGIPVQTKPMLMLKEVRQKLENISKAEKTKPSTSSMSTNKKGKPIST 166

  Fly   168 -AKKAVATKK-TAENKKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKPAVSAK 230
             .|:.|.:|| :::||...|||:...||.|             .|.|...:|.||:.||...:..
 Worm   167 MKKRGVMSKKRSSKNKMAPKAKSHGLKKKG-------------PATKSSGLVHKAAGAKNEAAPT 218

  Fly   231 PKKTVK 236
            .|..::
 Worm   219 TKMELR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33837NP_001027339.1 H15 43..130 CDD:238028 28/87 (32%)
hil-1NP_506680.1 Linker_histone 37..108 CDD:459846 25/70 (36%)

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