DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG33837 and LOC101732876

DIOPT Version :10

Sequence 1:NP_001027339.1 Gene:His1:CG33837 / 3772077 FlyBaseID:FBgn0053837 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004912081.2 Gene:LOC101732876 / 101732876 XenbaseID:XB-GENE-29086527 Length:224 Species:Xenopus tropicalis


Alignment Length:242 Identity:98/242 - (40%)
Similarity:125/242 - (51%) Gaps:37/242 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            ||::|.|    |..|.||..:||..:|     .|.||||    |:.|...:::..::...|||.|
 Frog     1 MSETAPA----PPPAEPAAAKKKQPKK-----GGAKAKK----PAGPSASELIVKAVSASKERSG 52

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLS---------AS 120
            .||.|:||.:.| .|  |.:|....:|..||:.|..|.|.|.||.||||||||:         |:
 Frog    53 VSLAALKKALAAGGY--DVEKNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKQLESKEKAA 115

  Fly   121 AKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSK-----KTAVGAADKKPKAKKAVATKKTAEN 180
            .||...|||| |..:|:|.::|.| ..||:..::|     |....|| |.||..||...||.|::
 Frog   116 KKKPAAPKAK-KPAAAKKALKSPK-KPKKVSAAAKSPKKVKKPAKAA-KSPKKPKAAKPKKVAKS 177

  Fly   181 KKTEKAKAKDAKKTGIIKSKPAATK--AKVTAAKPKAVVAKASKAKP 225
            ...:.||.|.||.......||.|||  ||..||||||  |||.||.|
 Frog   178 PAKKAAKPKAAKSPAKKAPKPKATKSPAKAKAAKPKA--AKAKKAAP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33837NP_001027339.1 H15 43..130 CDD:238028 37/96 (39%)
LOC101732876XP_004912081.2 H15 35..106 CDD:238028 30/72 (42%)

Return to query results.
Submit another query.