DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33831 and H4f3

DIOPT Version :10

Sequence 1:NP_001027329.1 Gene:His1:CG33831 / 3772075 FlyBaseID:FBgn0053831 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001395537.1 Gene:H4f3 / 684828 RGDID:1585568 Length:220 Species:Rattus norvegicus


Alignment Length:257 Identity:99/257 - (38%)
Similarity:125/257 - (48%) Gaps:56/257 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            ||::|.|..|:     ||.|||..|:|||..::....|:.:   |.||..:::..::...|||.|
  Rat     1 MSETAPAAPAA-----PAPVEKTPVKKKAKKTSSAAGKRKA---SGPPVSELITKAVAASKERSG 57

  Fly    66 SSLLAIKKYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.|. |  |.:|....||..|||.|..|.|:||||.||||||||:   ||....:|
  Rat    58 VSLAALKKALAAAGY--DVEKNNSRIKLGLKSLVSKGILVQTKGTGASGSFKLN---KKASSGEA 117

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKT 194
            |.|              :||:|.:..|...|:|.|..||..:...:||   |||.| |||     
  Rat   118 KPK--------------AKKVGAAKAKKPAGSAKKPKKATGSATPRKT---KKTPK-KAK----- 159

  Fly   195 GIIKSKPAATK-AKVTAAKPKAVVAKASKAKPAVSAKPKKTVKKASVSATAKKPKAKTTAAK 255
                 ||.||. ||..:..||.|.|          |||||..|.   .|.||.||||.|..|
  Rat   160 -----KPGATAGAKKVSKSPKKVKA----------AKPKKAAKS---PAKAKAPKAKATKPK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33831NP_001027329.1 H15 43..130 CDD:238028 38/87 (44%)
H4f3NP_001395537.1 H15 35..115 CDD:238028 38/87 (44%)

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