Sequence 1: | NP_001027230.1 | Gene: | mus201 / 3772069 | FlyBaseID: | FBgn0002887 | Length: | 1236 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012809.1 | Gene: | RAD27 / 853747 | SGDID: | S000001596 | Length: | 382 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 475 | Identity: | 101/475 - (21%) |
---|---|---|---|
Similarity: | 172/475 - (36%) | Gaps: | 139/475 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 708 NRLSPNKTPS--KNKSIKDFFETSYVVK------------RTPDKSQASNETSPGTPKTPKPFFR 758
Fly 759 KRTPKSGRKRASDANEDSDEEVSPTKRSSKASKSLFEPKEPEEEKTVDPEEIIKDAAEALKSQKT 823
Fly 824 SEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFL 888
Fly 889 NATDLTHGTITDDSDIWLFGGRTVYKNFF---------AQNKHVMEFRAEQIEQTFNCNRGKLIQ 944
Fly 945 LACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIKF--------------R 995
Fly 996 DWWQAHKCSNLPPGSSARLALRKKLKNIELHEGFPSGAVVEAYLAP-TIDDNRDAFSWGTPDVES 1059
Fly 1060 IREF--TRKSFGWTTSKTDDILMPVMKKINEKKIQGSIRNYFTAKSALRVQQPHVSKRVQLAIDK 1122
Fly 1123 MSGKIDETPEKPKKVTRTRR 1142 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mus201 | NP_001027230.1 | rad2 | 1..1122 | CDD:273166 | 95/453 (21%) |
PIN_XPG | 1..>121 | CDD:189038 | |||
PIN_XPG | <814..1084 | CDD:189038 | 63/295 (21%) | ||
H3TH_XPG | 940..1045 | CDD:188624 | 20/119 (17%) | ||
RAD27 | NP_012809.1 | PTZ00217 | 1..364 | CDD:240317 | 93/447 (21%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |