Protein Alignment mus201 and Fen1

DIOPT Version :10

• Sequence 1: NP_001027230.1
• Gene: mus201 / 3772069
• FlyBaseID: FBgn0002887
• Length: 1236
• Species: Drosophila melanogaster
• Sequence 2: XP_006231134.1
• Gene: Fen1 / 84490
• RGDID: 621821
• Length: 405
• Species: Rattus norvegicus
• Alignment Length: 370
• Identity: 84/370 - (22%)
• Similarity: 148/370 - (40%)
• Gaps: 91/370 - (24%)

  Fly   793 LFEPKEPEEEKTVDPEEIIKDAAEALKSQKTSEELQELATNLAQER-KELEIERNRQDRMGMSIS 856
            :|:.|.|:          :|....|.:|::.:|..::|  ..|||. .|.|:|:..: |: :.::
  Rat   109 IFDGKPPQ----------LKSGELAKRSERRAEAEKQL--QQAQEAGAEEEVEKFTK-RL-VKVT 159

  Fly   857 QRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNK 921
            ::.:.:|:.||.|.||||:.||.||||.||.|......:...|:|.|...||...:.::..|...
  Rat   160 KQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 224

  Fly   922 H---VMEFRAEQIEQTFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGIC 983
            .   :.||...::.|....|:.:.:.|..|:||||...:.|||...|::::
  Rat   225 KKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESVRGIGPKRAVDLI-------------- 275

  Fly   984 NQSVLQTLIKFRDWWQAHKCSNLPPGSSARLALRKKLKNIELHEGFPSGAVVEAYLAP-TIDDNR 1047
                           |.||       |...:..|.......:.|.:......:.:|.| .:|...
  Rat   276 ---------------QKHK-------SIEEIVRRLDPSKYPVPENWLHKEARQLFLEPEVLDPES 318

  Fly  1048 DAFSWGTPDVESIREFT--RKSFGWTTSKTDDILMPVMKKINEKK---IQGSIRNYFTAKSALRV 1107
            ....|..|:.|.:.:|.  .|.|      :::.:...:|::|:.:   .||.:.::|....:|
  Rat   319 VELKWSEPNEEELVKFMCGEKQF------SEERIRSGVKRLNKSRQGSTQGRLDDFFKVTGSL-- 375

  Fly  1108 QQPHVSKRVQLAIDKMSGKIDE-TPEKP-KKVTRT------RRAK 1144
                           .|.|..| .|:.| ||..:|      ||.|
  Rat   376 ---------------SSAKRKEPEPKGPAKKKAKTGGAGKFRRGK 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mus201	NP_001027230.1	rad2	1..1122	CDD:273166	73/338 (22%)
Fen1	XP_006231134.1	PTZ00217	26..384	CDD:240317	76/347 (22%)