| Sequence 1: | NP_001027230.1 | Gene: | mus201 / 3772069 | FlyBaseID: | FBgn0002887 | Length: | 1236 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001123481.3 | Gene: | GEN1 / 348654 | HGNCID: | 26881 | Length: | 908 | Species: | Homo sapiens |
| Alignment Length: | 534 | Identity: | 113/534 - (21%) |
|---|---|---|---|
| Similarity: | 200/534 - (37%) | Gaps: | 164/534 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 826 ELQELATNLAQERKELEIERNRQDRMGMSISQR------MSI--DCQELLRLFGIPYIVAPMEAE 882
Fly 883 AQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNK--HVMEFRAEQIEQTFNCNRGKLIQL 945
Fly 946 ACLVGSDY-TTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIKFRDWWQAHKCSNLP-- 1007
Fly 1008 --------------PGS-------SARLALRKK-----------------------LKNIELH-- 1026
Fly 1027 ------EGFPSGAVVEAYLAPTIDDNRD----AFSWGTPDVESIREFTRKSFGWTT--------- 1072
Fly 1073 -------------SKTDDILMPVMKKINEKKIQGSIRNYFTAKSALRVQQP-HVSKRVQLAIDKM 1123
Fly 1124 SGK-----IDET-------PE------KPKKVTRTRRAKAAPPTDDDLAIADVATK-----AARP 1165
Fly 1166 ------KRGKR---KAAPESVVLDGELPSTSQSIPKPEKCPRIPSSVEVIPQ-REKDLEQMRLNK 1220
Fly 1221 AKAAEILKNSAKAN 1234 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| mus201 | NP_001027230.1 | rad2 | 1..1122 | CDD:273166 | 88/387 (23%) |
| PIN_XPG | 1..>121 | CDD:189038 | |||
| PIN_XPG | <814..1084 | CDD:189038 | 84/348 (24%) | ||
| H3TH_XPG | 940..1045 | CDD:188624 | 34/159 (21%) | ||
| GEN1 | NP_001123481.3 | PIN_GEN1 | 2..206 | CDD:350217 | 44/133 (33%) |
| XPG-N domain. /evidence=ECO:0000269|PubMed:26682650 | 2..96 | 4/23 (17%) | |||
| XPG-I domain. /evidence=ECO:0000269|PubMed:26682650 | 122..208 | 34/85 (40%) | |||
| H3TH_GEN1 | 195..338 | CDD:188625 | 35/161 (22%) | ||
| 5'-3' exonuclease domain. /evidence=ECO:0000269|PubMed:26682650 | 208..384 | 36/194 (19%) | |||
| Chromodomain. /evidence=ECO:0000269|PubMed:26682650 | 390..464 | 16/85 (19%) | |||
| Chromo_2 | 398..458 | CDD:376128 | 12/71 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1094524at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||