DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus201 and Exo1

DIOPT Version :9

Sequence 1:NP_001027230.1 Gene:mus201 / 3772069 FlyBaseID:FBgn0002887 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_036142.2 Gene:Exo1 / 26909 MGIID:1349427 Length:837 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus201NP_001027230.1 rad2 1..1122 CDD:273166
PIN_XPG 1..>121 CDD:189038
PIN_XPG <814..1084 CDD:189038
H3TH_XPG 940..1045 CDD:188624
Exo1NP_036142.2 PIN_EXO1 1..201 CDD:350207
N-domain 1..99
Interaction with MSH3. /evidence=ECO:0000250 129..386
I-domain 138..229
H3TH_EXO1 213..289 CDD:188628
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 345..367
Interaction with MLH1. /evidence=ECO:0000250 387..488
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..477
AF-4 555..>765 CDD:368289
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 555..589
Interaction with MSH2. /evidence=ECO:0000250 591..837
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..740
Interaction with MLH1. /evidence=ECO:0000250 778..837
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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