DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus201 and BIVM-ERCC5

DIOPT Version :9

Sequence 1:NP_001027230.1 Gene:mus201 / 3772069 FlyBaseID:FBgn0002887 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_001191354.2 Gene:BIVM-ERCC5 / 100533467 HGNCID:43690 Length:1640 Species:Homo sapiens


Alignment Length:1243 Identity:341/1243 - (27%)
Similarity:565/1243 - (45%) Gaps:277/1243 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQQQ 94
            :|||||:|.:||.:|..|:::.|.|||.|||||||||::|:||:|:|||..|.||:.|:.:|:|:
Human   484 NISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQR 548

  Fly    95 RNKLSNEADRIQALLLQSLAKEKVVQQAL-GKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAA 158
            ::..|:::.:....||::..|.:.::.|. .|..|.|       |...:...|:||:.||.|...
Human   549 KDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEAL-------PSLTQVRRENDLYVLPPLQEE 606

  Fly   159 SVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPADVRHEILTDIKETRK 223
            ....:::|.|::.....:    .:...:..:..:.||||::|:.|.:||.:|:||||||:||..|
Human   607 EKHSSEEEDEKEWQERMN----QKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDMKEFTK 667

  Fly   224 QSSWGRLHE-LPARSDDFCSFQMKRLLKRRAVQESLEQAEQEM----GGHTLTYAELCDFFNEEG 283
            :..  .|.| :|..||||..:|:|.|||:..:.:.:|..::||    .||.....|     :|.|
Human   668 RRR--TLFEAMPEESDDFSQYQLKGLLKKNYLNQHIEHVQKEMNQQHSGHIRRQYE-----DEGG 725

  Fly   284 ILTPTAIEQCTRQISSDEHTRFLLVRDLKKKAMESTKQE--------------VKMEMIEEVPAE 334
            .|.    |..:|::.|::.:.::|::.::.|.:.....|              ||....|::..|
Human   726 FLK----EVESRRVVSEDTSHYILIKGIQAKTVAEVDSESLPSSSKMHGMSFDVKSSPCEKLKTE 786

  Fly   335 EE-DEKPSTSTKKEAVKSVDLGTEFDEDLAKALSMSMEETKVYDEKDYEYDSDQELRLNRAQTKQ 398
            :| |..|.:.....|:::..||:..:|:|                     :|:     ||.|.: 
Human   787 KEPDATPPSPRTLLAMQAALLGSSSEEEL---------------------ESE-----NRRQAR- 824

  Fly   399 LRHAAKGPARAYMIEYGGMNDEEVGNIMEATQFNDTQSLEKLLEITTVPTDMADNSIEEAKLISQ 463
               ....||                                                        
Human   825 ---GRNAPA-------------------------------------------------------- 830

  Fly   464 AIEESKQLSQAIEESKKNLNEDK-VEIV---DTDTDSDLEEVMEV----QELDKGKKNLEICVDI 520
            |::|.....:.:...|:.|::|: |::.   |..|.....|.|.:    :..|:|.|        
Human   831 AVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQTGGPGAEEMRINSSTENSDEGLK-------- 887

  Fly   521 TGQADSNDLFADIFEDGEANKIEKTISVEEDDDFIEVKDSEELKLDTEDENKPITNKSIKE---- 581
                         ..||:......|::..      .|..:||....|.:..:| |:...||    
Human   888 -------------VRDGKGIPFTATLASS------SVNSAEEHVASTNEGREP-TDSVPKEQMSL 932

  Fly   582 ---SNEVKPFIDEIIEVKDSQEAVPAE------------PN---LKPDLESILNDLKKQTAAVKD 628
               ..|..|..||.: :||.::.:|.|            ||   |.|...:..|.:.|.....:.
Human   933 VHVGTEAFPISDESM-IKDRKDRLPLESAVVRHSDAPGLPNGRELTPASPTCTNSVSKNETHAEV 996

  Fly   629 IQ----------------LNVNEEEKPKPK-----------VEISSILDELKVKMADVKNITLDN 666
            ::                |:.::|.|.||.           .|.|||:......:.:|:|:...|
Human   997 LEQQNELCPYESKFDSSLLSSDDETKCKPNSASEVIGPVSLQETSSIVSVPSEAVDNVENVVSFN 1061

  Fly   667 VKLSNSVPIILSSDDESTLKSSKIVPKQELIELCDSDDNKNNRLSPNKTPS-KNKSIKDFFETSY 730
            .|...:  .:.:..::.|.:|:    .|:||.:       ...:.|.:..| :::|...|.|...
Human  1062 AKEHEN--FLETIQEQQTTESA----GQDLISI-------PKAVEPMEIDSEESESDGSFIEVQS 1113

  Fly   731 VVKRTPDKSQASNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTK--RSSKASKSL 793
            |:        :..|.....|:|.||                .:|..:||:..|:  .:...|:||
Human  1114 VI--------SDEELQAEFPETSKP----------------PSEQGEEELVGTREGEAPAESESL 1154

  Fly   794 FEPKEPEEEKTVDPEEIIKDAAEALKSQK--TSEELQELATNLAQERKELEIERNRQDRMGMSIS 856
            .......::...:|:|..|||.::|...:  ..|||:.|.:||..::..|:.::.:|:|:..:::
Human  1155 LRDNSERDDVDGEPQEAEKDAEDSLHEWQDINLEELETLESNLLAQQNSLKAQKQQQERIAATVT 1219

  Fly   857 QRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNK 921
            .:|.::.||||||||||||.||||||||||.|:.||.|.|||||||||||||.|.||:|||.:||
Human  1220 GQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNK 1284

  Fly   922 HVMEFRAEQIEQTFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQS 986
            .|..::..........:|.|||.||.|:|||||.||..:|.|||:|||..|.|..          
Human  1285 FVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHG---------- 1339

  Fly   987 VLQTLIKFRDWW-QAHKCSNLPPGSSARLALRKKLKNIELHEGFPSGAVVEAYLAPTIDDNRDAF 1050
             |:.|:||.:|| :|.|...:.| :.....::|||:.::|..|||:.||.||||.|.:||::.:|
Human  1340 -LEPLLKFSEWWHEAQKNPKIRP-NPHDTKVKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSF 1402

  Fly  1051 SWGTPDVESIREFTRKSFGWTTSKTDDILMPVMKKINEKKIQGSIRNYFTAKSALRVQQPHVSKR 1115
            .||.||::.||||.::.|||..:|||:.|.||:|:::.::.|..|.::|    .|..|:...:||
Human  1403 LWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQLDAQQTQLRIDSFF----RLAQQEKEDAKR 1463

  Fly  1116 VQLAIDKMSGKIDETPEKPKKVTRTRRAKAAPPTDDDLAIADVATKAARPKRGKRKAAPESVVLD 1180
            ::  ..:::..:.....|.|:...:.....:...:.:..:.|.| |....|||......||..|.
Human  1464 IK--SQRLNRAVTCMLRKEKEAAASEIEAVSVAMEKEFELLDKA-KGKTQKRGITNTLEESSSLK 1525

  Fly  1181 GELPSTSQ 1188
            .:..|.|:
Human  1526 RKRLSDSK 1533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus201NP_001027230.1 rad2 1..1122 CDD:273166 328/1175 (28%)
PIN_XPG 1..>121 CDD:189038 40/90 (44%)
PIN_XPG <814..1084 CDD:189038 126/272 (46%)
H3TH_XPG 940..1045 CDD:188624 45/105 (43%)
BIVM-ERCC5NP_001191354.2 rad2 484..1483 CDD:273166 330/1190 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094524at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101242
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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