DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2B:CG33902 and his-48

DIOPT Version :10

Sequence 1:NP_001027300.1 Gene:His2B:CG33902 / 3772058 FlyBaseID:FBgn0053902 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_502132.1 Gene:his-48 / 178049 WormBaseID:WBGene00001922 Length:123 Species:Caenorhabditis elegans


Alignment Length:192 Identity:44/192 - (22%)
Similarity:66/192 - (34%) Gaps:79/192 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EQERFTIWMKS-----LVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFT--LR 97
            |:.|   ||..     |:....|..:.     ||.|..|.....:|.:::|:.|...|:|.  .:
 Worm    43 EENR---WMNESITALLIGLGTGVVIL-----LISRGKNSHLLVFSEDLFFIYLLPPIIFNAGFQ 99

  Fly    98 QKKLGFFKSW---EGYNSTGTRFRLRKIFKILPRESSSSYKVVMGSRIVDGDQQSCYKIVNRGSV 159
            .||..||:::   ..:.:.||                    ||           || .|::.|::
 Worm   100 VKKKQFFRNFVTIMAFGAIGT--------------------VV-----------SC-TIISLGAI 132

  Fly   160 FAIKDGSGRLMAEVKNKLSDISGLDLG------------DDVLTMMV----EPQLDHSLIMG 205
            ...|            || ||...|||            |.|.|:.|    |..|.:||:.|
 Worm   133 QFFK------------KL-DIGTFDLGDFLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33902NP_001027300.1 HFD_H2B 33..120 CDD:467035 21/89 (24%)
his-48NP_502132.1 HFD_H2B 27..120 CDD:467035 19/84 (23%)

Return to query results.
Submit another query.