DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG33801 and AT1G54230

DIOPT Version :9

Sequence 1:NP_001027282.1 Gene:His1:CG33801 / 3772056 FlyBaseID:FBgn0053801 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_175825.2 Gene:AT1G54230 / 841864 AraportID:AT1G54230 Length:232 Species:Arabidopsis thaliana


Alignment Length:96 Identity:23/96 - (23%)
Similarity:46/96 - (47%) Gaps:15/96 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GKGASGSFKLSASA-----KKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAAD---- 163
            |:...|.||.:...     ...:..:.:.:.|.||:|::  ||.::.:.:..::......|    
plant    35 GRDVDGIFKFNNDRYVIPDNSRERLRGEVEKLVAERKIE--KVGNRYMMMMPQRVPATREDSTTP 97

  Fly   164 -KKPKAKKAVATKKTAENKKTEKAKAKDAKK 193
             :.|:| :||| |..||.:..| .:||:|::
plant    98 QRDPQA-EAVA-KLVAETEHLE-FQAKEAQE 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33801NP_001027282.1 Linker_histone 46..118 CDD:278939 4/9 (44%)
AT1G54230NP_175825.2 H15 15..77 CDD:197772 10/43 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11467
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.