DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG33801 and H1f6

DIOPT Version :10

Sequence 1:NP_001027282.1 Gene:His1:CG33801 / 3772056 FlyBaseID:FBgn0053801 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_036711.1 Gene:H1f6 / 24438 RGDID:2778 Length:208 Species:Rattus norvegicus


Alignment Length:235 Identity:82/235 - (34%)
Similarity:113/235 - (48%) Gaps:39/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASA-TPSHPPTQQMVDASIKNLKEHG 64
            ||::|.|.|::.|.||        |:|.|:...|.|...|:| .|......:::..::...:|..
  Rat     1 MSETAPAASSTLVPAP--------VEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERA 57

  Fly    65 GSSLLAIKKYITAT-YKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPK 128
            |.||.|:||.:.|. |  |.:|....||..||..|..|.|:||||.|||||||||..|....| |
  Rat    58 GMSLAALKKALAAAGY--DVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGND-K 119

  Fly   129 AKSKVLSAEKKVQSKKVASKKIGVS----SKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAK 189
            .|.|        :|....:||:|:|    |.|::.....|||   ||..||.:...:||:.||..
  Rat   120 GKGK--------KSASAKAKKLGLSRASRSPKSSKTKVVKKP---KATPTKGSGSRRKTKGAKGL 173

  Fly   190 DAKKTGIIKSKPAATKAKVT---AAKPKAVVAKASKAKPA 226
            ..:|:      ||  ||:.|   :.|.|.|:.|....|.|
  Rat   174 QQRKS------PA--KARATNSNSGKSKMVMQKTDLRKAA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33801NP_001027282.1 H15 43..130 CDD:238028 35/87 (40%)
H1f6NP_036711.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 16/45 (36%)
H15 36..116 CDD:238028 33/81 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..208 50/133 (38%)

Return to query results.
Submit another query.