DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33801 and LOC101731738

DIOPT Version :9

Sequence 1:NP_001027282.1 Gene:His1:CG33801 / 3772056 FlyBaseID:FBgn0053801 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004919180.1 Gene:LOC101731738 / 101731738 -ID:- Length:227 Species:Xenopus tropicalis


Alignment Length:242 Identity:95/242 - (39%)
Similarity:126/242 - (52%) Gaps:34/242 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKEHGG 65
            |::::||.:|.|  |.||..:||..:|     .|.||||    |:.|...:::..::...||..|
 Frog     1 MAETSVAETALP--AEPAAAKKKQPKK-----GGAKAKK----PAGPSAAELIVKAVSASKERSG 54

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLS---------AS 120
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:         |:
 Frog    55 VSLAALKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 117

  Fly   121 AKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSK-----KTAVGAADKKPKAKKAVATKKTAEN 180
            .||...||||....:|:|..:|.| ..||:..::|     |....|| |.||..||...||.|::
 Frog   118 KKKPAAPKAKKPAAAAKKAPKSPK-KPKKVSAAAKSPKKVKKPAKAA-KSPKKPKAAKPKKVAKS 180

  Fly   181 KKTEKAKAKDAKKTGIIKSKPAATK--AKVTAAKPKAVVAKASKAKP 225
            ...:.||.|.||......:||.|||  ||..||||||  |||.||.|
 Frog   181 PAKKAAKPKAAKSPAKKPTKPKATKSPAKAKAAKPKA--AKAKKAAP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33801NP_001027282.1 Linker_histone 46..118 CDD:278939 28/72 (39%)
LOC101731738XP_004919180.1 Linker_histone 39..106 CDD:366156 27/68 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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