DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33801 and LOC100497289

DIOPT Version :9

Sequence 1:NP_001027282.1 Gene:His1:CG33801 / 3772056 FlyBaseID:FBgn0053801 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_031760172.1 Gene:LOC100497289 / 100497289 -ID:- Length:219 Species:Xenopus tropicalis


Alignment Length:234 Identity:96/234 - (41%)
Similarity:122/234 - (52%) Gaps:26/234 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKEHGG 65
            |:::|..|:.:|   |||...||..|.|.:.:.|.||||    ||.|...:::..::...||..|
 Frog     1 MAETAAETAPAP---PPAEAAKKKQQPKKAAAGGAKAKK----PSGPSAAELIVKAVSASKERSG 58

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:....:.|:..|
 Frog    59 VSLAALKKALAAGGY--DVERNNSCLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 121

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKK-TAVGAADKKPK-----AKKAVATK--KTAENKKTEKA 186
            |.|  .|..|.:....|:||...|.|| ..|.||.|.||     ||.|.:.|  |.|:.||..|:
 Frog   122 KKK--PAAPKAKKPAAAAKKAPKSPKKLKKVSAAAKSPKKVKKPAKAAKSPKKPKAAKPKKVAKS 184

  Fly   187 KAKDAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKP 225
            .||.|.|....||  .|.|||  ||||||  |||.||.|
 Frog   185 PAKKAAKPKAAKS--PAKKAK--AAKPKA--AKAKKAAP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33801NP_001027282.1 Linker_histone 46..118 CDD:278939 28/72 (39%)
LOC100497289XP_031760172.1 H15 37..113 CDD:238028 31/77 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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