DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33839 and LOC108348882

DIOPT Version :9

Sequence 1:NP_001027343.1 Gene:His3:CG33839 / 3772032 FlyBaseID:FBgn0053839 Length:136 Species:Drosophila melanogaster
Sequence 2:XP_038954262.1 Gene:LOC108348882 / 108348882 RGDID:11450965 Length:215 Species:Rattus norvegicus


Alignment Length:136 Identity:116/136 - (85%)
Similarity:121/136 - (88%) Gaps:0/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 65
            :|.|||||.||||.||||||||||||.|.||:||||||||.||||||||.|||.|||||||||||
  Rat    80 VAHTKQTALKSTGAKAPRKQLATKAACKCAPSTGGVKKPHHYRPGTVALCEIRCYQKSTELLIRK 144

  Fly    66 LPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
            ||||||||:|||||||||.|||:|..|||.|||||||||||||||||||||||||||||||||.|
  Rat   145 LPFQRLVRKIAQDFKTDLCFQSAATGALQRASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLASR 209

  Fly   131 IRGERA 136
            |.|:.|
  Rat   210 IGGDHA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33839NP_001027343.1 PTZ00018 1..136 CDD:185400 115/134 (86%)
LOC108348882XP_038954262.1 PLN00121 80..215 CDD:177733 115/134 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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