DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and REG1A

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_002900.2 Gene:REG1A / 5967 HGNCID:9951 Length:166 Species:Homo sapiens


Alignment Length:194 Identity:39/194 - (20%)
Similarity:63/194 - (32%) Gaps:61/194 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVLFCLLSLLACAAGQRITTIHLDGVQYFIS---RMNPYSPELNYFL--------AYQYCRSLGL 57
            :::.||: .|:.:.||...|   :..|..||   ..|.|.....||.        |..||:::..
Human     9 MLISCLM-FLSQSQGQEAQT---ELPQARISCPEGTNAYRSYCYYFNEDRETWVDADLYCQNMNS 69

  Fly    58 -QLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGLPFNATFDFFENSADAIQ 121
             .|.|..|:.:...:.:.:|.:|..:::.|                                   
Human    70 GNLVSVLTQAEGAFVASLIKESGTDDFNVW----------------------------------- 99

  Fly   122 AGLLDPVDH-------NSNTSPQRTARDSSSGAEKG-CVILKQPT--LKWMPEDCSAVKDFICE 175
            .||.||..:       .|..|.:.....:.|....| ||.|...|  .||....|.....|:|:
Human   100 IGLHDPKKNRRWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCEDKFSFVCK 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 32/167 (19%)
REG1ANP_002900.2 CLECT 36..164 CDD:321932 30/163 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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