DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nw and clec19a

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001315005.1 Gene:clec19a / 570145 ZFINID:ZDB-GENE-080917-46 Length:207 Species:Danio rerio


Alignment Length:71 Identity:20/71 - (28%)
Similarity:29/71 - (40%) Gaps:13/71 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 HDR----SLPDTDSTDVDVEDQEADLDGEEHDD--HEAEGEEEHDEHDNFEEHARELSNDNDGDI 323
            |||    ::..||.:..:.    :..||.:.||  |....||:..|....:..|....|||:.| 
Zfish   134 HDRRQEGTMEWTDGSPFEY----SYWDGNQPDDGIHRIPEEEDCVEIWYRQNSALRSWNDNNCD- 193

  Fly   324 KEHVFP 329
              ..||
Zfish   194 --KAFP 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057
clec19aNP_001315005.1 CLECT_CEL-1_like 62..202 CDD:153059 20/71 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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