DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and REG3A

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_002571.1 Gene:REG3A / 5068 HGNCID:8601 Length:175 Species:Homo sapiens


Alignment Length:142 Identity:31/142 - (21%)
Similarity:46/142 - (32%) Gaps:58/142 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 YGNYDF--------WT----------SGNRLGT-----GMF---LWMSTGLPFNATFDFFENSAD 118
            ||::.:        ||          |||.:..     |.|   |..|.|           ||..
Human    47 YGSHCYALFLSPKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIG-----------NSYS 100

  Fly   119 AIQAGLLDPVDHNSNTSPQRTA---------------RDSSSGAEKG-CVILKQPT--LKWMPED 165
            .:..||.||   ...|.|....               |:.|:.:..| |..|.:.|  |:|...:
Human   101 YVWIGLHDP---TQGTEPNGEGWEWSSSDVMNYFAWERNPSTISSPGHCASLSRSTAFLRWKDYN 162

  Fly   166 CSAVKDFICEQT 177
            |:....::|:.|
Human   163 CNVRLPYVCKFT 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 30/139 (22%)
REG3ANP_002571.1 CLECT_REG-1_like 40..173 CDD:153064 30/139 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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