DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nw and clec-32

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001023952.1 Gene:clec-32 / 3565962 WormBaseID:WBGene00009860 Length:365 Species:Caenorhabditis elegans


Alignment Length:213 Identity:40/213 - (18%)
Similarity:68/213 - (31%) Gaps:70/213 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 ETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGLPFNATFDFFENSA-DAIQAGLL- 125
            :|:|.|:|:.     ..||....::..|....            ||.|||..||: |....||: 
 Worm   123 QTRENADSVC-----MSYGGSTLFSIRNEQEN------------NAIFDFVSNSSVDYFWTGLIC 170

  Fly   126 -----------------DPVDHNSNTSPQRTARDS----SSGAEKGCVILKQPTLKWMPEDCSAV 169
                             |..|:.|:..|.....:.    ::|:|.|         ||....|:..
 Worm   171 KGNTISSCIWDKESGSADGYDNFSDDYPDVAIGECVYFITTGSEAG---------KWKSGSCNPT 226

  Fly   170 KDFICE--------------QTRCYYYNYGSIPVSSAQ-------GRPITSTTPRTPASLMNLHV 213
            ..||||              ...||.....|..|:.:|       |..::.|:......:.::::
 Worm   227 MSFICELPPTIQDNNCENNYNNHCYLRYDLSYTVAQSQKFCRSICGNLVSITSANENRYVQSIYI 291

  Fly   214 AATTTPLPLLMSTSGAMY 231
            ......|..::.....:|
 Worm   292 GGGYITLGAVVPNVNIIY 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 31/149 (21%)
clec-32NP_001023952.1 CLECT 104..232 CDD:214480 29/134 (22%)
CLECT 249..356 CDD:214480 9/61 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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