DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and Reg1

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_033068.1 Gene:Reg1 / 19692 MGIID:97895 Length:165 Species:Mus musculus


Alignment Length:207 Identity:40/207 - (19%)
Similarity:66/207 - (31%) Gaps:87/207 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVLFCLLSL----------------LACAAGQRITTIHLDGVQYFISRMNPYSPELNYFL----- 47
            |:|.||:.|                ::|..|.                 |.||....||.     
Mouse     8 ILLSCLIVLSPSQGQEAEEDLPSARISCPEGS-----------------NAYSSYCYYFTEDRLT 55

  Fly    48 ---AYQYCRSLGL-QLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGLPFNA 108
               |..:|:::.. .|.|..::.:...:.:.:|.:|..:.:.||                     
Mouse    56 WADADLFCQNMNSGYLVSVLSQAEGNFVASLIKESGTTDANVWT--------------------- 99

  Fly   109 TFDFFENSADAIQAGLLDPVD----HNSNTS---PQRTARDSSSGAEKG-CVILKQPT--LKWMP 163
                          ||.||..    |.|:.|   .:..|..|.:.:.:| ||.|...|  .||..
Mouse   100 --------------GLHDPKRNRRWHWSSGSLFLYKSWATGSPNSSNRGYCVSLTSNTGYKKWKD 150

  Fly   164 EDCSAVKDFICE 175
            ::|.|...|:|:
Mouse   151 DNCDAQYSFVCK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 33/164 (20%)
Reg1NP_033068.1 CLECT 35..163 CDD:295302 35/180 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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