DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nw and clec-26

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507254.2 Gene:clec-26 / 188626 WormBaseID:WBGene00011852 Length:367 Species:Caenorhabditis elegans


Alignment Length:287 Identity:53/287 - (18%)
Similarity:86/287 - (29%) Gaps:107/287 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TTIHLDGVQYFISRMNPYSPELNYFLAY-----------------------QYCRSL-GLQLASF 62
            :|.|.......||..:|.|...||..|.                       |.|.:| |..|.|.
 Worm    85 STTHWSTSSTPISSTSPTSAPENYSCAAGFPYINHKCWKLVTGPQNRADADQACNNLGGSTLFSI 149

  Fly    63 ETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGL------PFNATFDFFENSADAIQ 121
            ...:..:::..::|:....|               ||  |||      |...|:|        :|
 Worm   150 RNDQDNQAVLEFVKDQQVKN---------------LW--TGLICDNNDPSLCTWD--------VQ 189

  Fly   122 AGLLDPVDHNSNTSPQRTARDSSSGAEKGCVILKQPTL---KWMPEDCSAVKDFICEQTRCYY-- 181
            :|        :..:....|:...||..:.|:.......   :|....|:....|:||.....|  
 Worm   190 SG--------TTAAYNNFAKGYPSGVNEECIYYMTTGTQAGQWASGLCNETMSFVCELPTTIYDE 246

  Fly   182 ---YNYGSIPVSSAQGRPITSTTPRTPASLMNLHVAATTTPLPLLMSTSGAMYTAAKAKS-SPAV 242
               |||              :|...||.||..                     ||:.|:| ..::
 Worm   247 TCKYNY--------------NTYCYTPYSLGK---------------------TASDAQSYCTSL 276

  Fly   243 GHRLIDDSSSQQQPSFMSFKLNHDRSL 269
            |..|:...|..:....|:.....::::
 Worm   277 GSNLVSIHSGNENRYVMTINFGRNKNI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 33/177 (19%)
clec-26NP_507254.2 CLECT 110..238 CDD:214480 26/160 (16%)
CLECT 252..361 CDD:214480 14/87 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.