DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and clec-21

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_494002.2 Gene:clec-21 / 188250 WormBaseID:WBGene00020327 Length:421 Species:Caenorhabditis elegans


Alignment Length:235 Identity:55/235 - (23%)
Similarity:86/235 - (36%) Gaps:46/235 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVLFCLLSLLACAAGQRITTIHLDGVQYFISR-MNPYSPELNYFLAYQYCRSLGLQLASFETKEK 67
            ::|..:...||.|:...|.|   .|.:...:| :..:|...||..|.:.|...|..|.:..:||:
 Worm     5 LILLLVFIFLASASKDPICT---HGYKLVKNRCLKLFSEPSNYENAQRQCYQHGGPLVTIRSKEE 66

  Fly    68 AESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGLPFNATFDFFENSADAIQAGLLDPV--DH 130
                          |.|.....   |.|..||:  ||......|         |.|.|...  |.
 Worm    67 --------------NLDVLALA---GKGHNLWI--GLYCFTVLD---------QNGSLSNCIWDD 103

  Fly   131 NSNTSPQRTARDSSSGA---EKGCVILKQPTLKWMPEDC-SAVKDFICE-----QTRCY--YYNY 184
            :..|:.|..|.:|.:|:   |..||.:...|..|:.... :.:..|:||     :..|.  |..|
 Worm   104 SLGTAEQYHAFESFAGSGSRETPCVTVNTTTGYWISTKYENGMYPFVCEMPTTIEDDCQNNYNGY 168

  Fly   185 GSIPVSSAQG-RPITSTTPRTPASLMNLHVAATTTPLPLL 223
            ..||.|.|:. .....:......:|:::|.|.....|.:|
 Worm   169 CYIPHSEAKSFENAQKSCEEECGNLVSIHSANENLYLNIL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 36/156 (23%)
clec-21NP_494002.2 CLECT 23..152 CDD:214480 36/159 (23%)
CLECT 165..284 CDD:214480 11/44 (25%)
CUB 307..408 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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