DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and clec-7

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_504865.1 Gene:clec-7 / 184314 WormBaseID:WBGene00017364 Length:417 Species:Caenorhabditis elegans


Alignment Length:201 Identity:45/201 - (22%)
Similarity:72/201 - (35%) Gaps:67/201 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YSPELNYFLAYQYCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMF------ 97
            ::...|:..|.:.||..|..|.:.:.:....:::|:   ||       ||.:.|..|::      
 Worm    40 FTTPANHSAAEKTCRKYGATLVTVKNENDNHAISTF---AG-------TSASLLWIGLYCFGNDP 94

  Fly    98 ---LW-MSTGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKGCVILKQPT 158
               || .|||     :.|.::|.|....  |:|         ..:....|..||..|        
 Worm    95 SKCLWDDSTG-----SADVYDNFASGFP--LVD---------IGKCVYYSVQGALTG-------- 135

  Fly   159 LKWMPEDCS-AVKDFICE-------------QTRCY-YYNYGSIPVSSAQGRPITSTTPRTPASL 208
             ||:.|:|. :.|.|:||             ...|| ||...|..|:.       :|..:....|
 Worm   136 -KWLTENCDLSSKAFMCELPTTFSDSCIYNYNGYCYDYYAEASFVVAQ-------NTCEQFCGDL 192

  Fly   209 MNLHVA 214
            ..:|.|
 Worm   193 ATIHTA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 35/160 (22%)
clec-7NP_504865.1 CLECT 25..152 CDD:214480 33/146 (23%)
CLECT 165..282 CDD:214480 10/41 (24%)
CUB 308..412 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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