DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and clec-34

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507234.1 Gene:clec-34 / 180116 WormBaseID:WBGene00012023 Length:363 Species:Caenorhabditis elegans


Alignment Length:229 Identity:45/229 - (19%)
Similarity:77/229 - (33%) Gaps:72/229 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWMSTGL------PFNATFDFFE 114
            |..|.|...:::..:|..::.|||..|               ||  |||      .|:.|:|   
 Worm   137 GSTLFSIRNEQENNAMLGFMLNAGVDN---------------LW--TGLICVGKTTFSCTWD--- 181

  Fly   115 NSADAIQAGLLDPVDHNSNTSPQRTARDS----SSGAEKGCVILKQPTLKWMPEDCSAVKDFICE 175
                 :::|.....:..::.||..|..:.    .:|.:.|         :|....|:....|:||
 Worm   182 -----MESGTTSVYNSFASESPDNTYGNCVYFIITGTQAG---------QWKSGLCNMTMSFVCE 232

  Fly   176 --------------QTRCYYYNYGSIPVSSAQGRPITSTTPRTPASLMNLHVAATTTPLPLLMST 226
                          ...||.....|..|..||....|..     |:|:::|.|.....:..:...
 Worm   233 LPPTVHDKNCINNYNNHCYLRYDDSDTVVEAQRFCNTKC-----ANLVSIHSANENRFIQTIYYV 292

  Fly   227 SGAMYTAAKA---------KSSPAVGHRLIDDSS 251
            .|.:...|.|         ..||.:.:.:.|:|:
 Worm   293 DGYIALGAVAPIIDYIVWMDGSPQLYNNIQDNSN 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 27/143 (19%)
clec-34NP_507234.1 CLECT 104..232 CDD:214480 25/128 (20%)
CLECT 246..356 CDD:214480 18/86 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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