DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nw and clec-73

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_500445.1 Gene:clec-73 / 177153 WormBaseID:WBGene00021579 Length:577 Species:Caenorhabditis elegans


Alignment Length:85 Identity:19/85 - (22%)
Similarity:30/85 - (35%) Gaps:19/85 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ELNYFLAYQYCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNR--------------L 92
            :|.:..|...|.:.|..||...:.::||.:..::..|...|..||....|              .
 Worm   429 KLTFADAAAACEAKGANLAGINSLKEAEQLGNHVVGANLNNEQFWLGAQRRTECLENNDWKPPCT 493

  Fly    93 GTGMFLWMSTGLPFNATFDF 112
            ...:|.||:     |...||
 Worm   494 RDKIFEWMN-----NVATDF 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 19/85 (22%)
clec-73NP_500445.1 CLECT 108..>174 CDD:382969
CLECT <445..563 CDD:382969 15/69 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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