DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nw and LOC110438686

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_021327448.1 Gene:LOC110438686 / 110438686 -ID:- Length:87 Species:Danio rerio


Alignment Length:92 Identity:21/92 - (22%)
Similarity:34/92 - (36%) Gaps:24/92 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ISRMNPYSP------------ELNYFLAYQYCRSLGLQLASFETKEKAESMTTYLKN-----AGY 80
            :|.:.|.||            ..|:..:.||||..|..|...:::||...:|:::..     ...
Zfish     1 MSHLTPLSPWCALDEFFSSMDSKNWSESRQYCRDRGEDLLIIKSEEKQRRVTSFITEKVKMPVWL 65

  Fly    81 GNYDFWTSGNRLGTGMFLWMSTGLPFN 107
            |..|....||      .:|:... |.|
Zfish    66 GLTDAEIEGN------MIWVDNS-PLN 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 21/92 (23%)
LOC110438686XP_021327448.1 CLECT 16..>86 CDD:321932 17/77 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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