DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and clec4e

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_004917035.1 Gene:clec4e / 100497788 XenbaseID:XB-GENE-6035508 Length:218 Species:Xenopus tropicalis


Alignment Length:152 Identity:32/152 - (21%)
Similarity:62/152 - (40%) Gaps:42/152 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YFISRMNPYSPELNYFLAYQYCRSLG--LQLASFETKEKAESMTTYLK-NAGYGNYD-FWTSGNR 91
            |:|:     :.:.|:..|..:|...|  |.:.:.|.::|      :|| .:|..|.. ||...:.
 Frog    99 YYIT-----TKKTNWQKARSFCVQEGGDLVVVNSEKEQK------FLKEKSGVSNLKRFWIGLSD 152

  Fly    92 L-GTGMFLWMSTGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKGCVILK 155
            : ..|.:.|:. |..::.::.|::..         :|.||.:|               :.|..|.
 Frog   153 IEEEGTWTWVD-GTDYSTSYQFWKKG---------EPNDHLTN---------------EDCAHLW 192

  Fly   156 QPTLKWMPEDCSAVKDF-ICEQ 176
            .||.:|....|:..:.: |||:
 Frog   193 NPTGEWNDVHCTFQEPYAICEK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 31/150 (21%)
clec4eXP_004917035.1 CLECT_DC-SIGN_like 87..214 CDD:153060 31/150 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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