DRSC/TRiP Functional Genomics Resources

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Protein Alignment nw and clec19a

DIOPT Version :9

Sequence 1:NP_001027435.2 Gene:nw / 3772015 FlyBaseID:FBgn0283508 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002932255.2 Gene:clec19a / 100491258 XenbaseID:XB-GENE-6049079 Length:193 Species:Xenopus tropicalis


Alignment Length:141 Identity:27/141 - (19%)
Similarity:45/141 - (31%) Gaps:31/141 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 FETKEKAESMTTYLKNAGYGNYDFWTSGNRLG------TGMFLW------------MSTGLPFNA 108
            |.|:........:..|..:...||:.|...||      ..:..|            ..||:|   
 Frog    50 FWTEYNGNCYRFFPMNKTWAEADFYCSEFSLGRTTAKLVSIHSWDENVFVFDLVNSQVTGVP--- 111

  Fly   109 TFDFFENSADAIQAGLLD-----PVDHNSNTSPQRTARDSSSGAEKGCVIL----KQPTLKWMPE 164
             .|.:...:|..|.|..:     |.|::.....|.....:||..::.||.:    ......|...
 Frog   112 -TDIWIGLSDRRQEGEFEWTDGTPNDYSYWDGNQPDDATNSSPEDEDCVQMWYRYYSALRSWNDN 175

  Fly   165 DCSAVKDFICE 175
            .|:....|:|:
 Frog   176 SCNRGFPFVCK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nwNP_001027435.2 CLECT 31..176 CDD:153057 27/141 (19%)
clec19aXP_002932255.2 CLECT_CEL-1_like 47..187 CDD:153059 27/141 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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