Protein Alignment CG17768 and SmD3

DIOPT Version :9

• Sequence 1: NP_001027236.1
• Gene: CG17768 / 3772012
• FlyBaseID: FBgn0032240
• Length: 154
• Species: Drosophila melanogaster
• Sequence 2: NP_725106.1
• Gene: SmD3 / 36306
• FlyBaseID: FBgn0023167
• Length: 151
• Species: Drosophila melanogaster
• Alignment Length: 154
• Identity: 46/154 - (29%)
• Similarity: 67/154 - (43%)
• Gaps: 23/154 - (14%)

  Fly     2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTI 66
            :|:.:|..|:.|.:..|...||.|.|.|:..:..||..:..:..|.:|| |...:...|||||.|
  Fly     5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYIRGSKI 68

  Fly    67 KYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGNSSQNQ------------RGGRPGGGNRNNVG 119
            ::|.:|    ||:|.....|.    :..|..||.:.:.:            |||.||||  ...|
  Fly    69 RFLILP----DMLKNAPMFKK----QTGKGLGGTAGRGKAAILRAQARGRGRGGPPGGG--RGTG 123

  Fly   120 NRPGQGYGGAANNAMRLGGAAGQG 143
            ..||...|.....|.:.|...|:|
  Fly   124 GPPGAPGGSGGRGAWQGGPTGGRG 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17768	NP_001027236.1	LSm4	2..77	CDD:212470	24/74 (32%)
SmD3	NP_725106.1	Sm_D3	6..75	CDD:212468	24/73 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45460806
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840