Protein Alignment CG17768 and LSM4

DIOPT Version :9

• Sequence 1: NP_001027236.1
• Gene: CG17768 / 3772012
• FlyBaseID: FBgn0032240
• Length: 154
• Species: Drosophila melanogaster
• Sequence 2: NP_036453.1
• Gene: LSM4 / 25804
• HGNCID: 17259
• Length: 139
• Species: Homo sapiens
• Alignment Length: 155
• Identity: 97/155 - (62%)
• Similarity: 108/155 - (69%)
• Gaps: 21/155 - (13%)

  Fly     1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGST 65
            |||||||||||:|||||||||||||||||||||:|||||||:|||||:|||:|||||||||||||
Human     1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGST 65

  Fly    66 IKYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGNSSQNQRGGRPGGGNRNNVGNRPGQG-YGGA 129
            |||||||||:||||||:..||.|       .|||...|.|:.||..||        .|:| :||.
Human    66 IKYLRIPDEIIDMVKEEVVAKGR-------GRGGLQQQKQQKGRGMGG--------AGRGVFGGR 115

  Fly   130 ANNAMRLGGAAGQGNRLPHAAKNRK 154
            ..     ||..|.|...|.....|:
Human   116 GR-----GGIPGTGRGQPEKKPGRQ 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17768	NP_001027236.1	LSm4	2..77	CDD:212470	68/74 (92%)
LSM4	NP_036453.1	LSm4	2..77	CDD:212470	68/74 (92%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	87..139		20/69 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165148000
Domainoid	1	1.000	134	1.000	Domainoid score	I5044
eggNOG	1	0.900	-	-		E1_KOG3293
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	185	1.000	Inparanoid score	I3960
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55325
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0005075
OrthoInspector	1	1.000	-	-		oto89524
orthoMCL	1	0.900	-	-		OOG6_102392
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R668
SonicParanoid	1	1.000	-	-		X4115
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	12	11.730