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Protein Alignment CG17768 and smd3
DIOPT Version :10
| Sequence 1: | NP_001027236.1 |
Gene: | CG17768 / 3772012 |
FlyBaseID: | FBgn0032240 |
Length: | 154 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_595699.1 |
Gene: | smd3 / 2540884 |
PomBaseID: | SPBC19C2.14 |
Length: | 97 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 72 |
Identity: | 30/72 - (41%) |
| Similarity: | 45/72 - (62%) |
Gaps: | 1/72 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTI 66
|.:.||...|.|.:.:||:||.||.|.|:..:..||..:||:..|::|| |...:.:.|||||.|
pombe 3 LCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDG-RVSHLDQVYIRGSHI 66
Fly 67 KYLRIPD 73
::|.:||
pombe 67 RFLIVPD 73
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG17768 | NP_001027236.1 |
LSm4 |
2..77 |
CDD:212470 |
30/72 (42%) |
| smd3 | NP_595699.1 |
Sm_D3 |
5..73 |
CDD:212468 |
27/68 (40%) |
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