Protein Alignment CG17768 and lsm-4

DIOPT Version :9

• Sequence 1: NP_001027236.1
• Gene: CG17768 / 3772012
• FlyBaseID: FBgn0032240
• Length: 154
• Species: Drosophila melanogaster
• Sequence 2: NP_495514.1
• Gene: lsm-4 / 174193
• WormBaseID: WBGene00003078
• Length: 123
• Species: Caenorhabditis elegans
• Alignment Length: 126
• Identity: 79/126 - (62%)
• Similarity: 99/126 - (78%)
• Gaps: 8/126 - (6%)

  Fly     1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGST 65
            :||||||||||:|||||||||||||||||.:|||||||:|.|||.||||||:|::|.|.|:||||
 Worm     2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYVRGST 66

  Fly    66 IKYLRIPDEVIDMVKEDA-QAKSRNRTEMNKNRGGNSSQNQRGGRPGGGNRNNVGNRPGQG 125
            |||||||:.|:|:||.:. :.:.:.:.|.::.|||.     ||||  ||:|...|||.|:|
 Worm    67 IKYLRIPETVVDLVKTEVNEVRRQQQREQSRGRGGG-----RGGR--GGHRGGGGNRGGRG 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17768	NP_001027236.1	LSm4	2..77	CDD:212470	60/74 (81%)
lsm-4	NP_495514.1	LSm4	3..78	CDD:212470	60/74 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159945
Domainoid	1	1.000	114	1.000	Domainoid score	I3814
eggNOG	1	0.900	-	-		E1_KOG3293
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H136453
Inparanoid	1	1.050	158	1.000	Inparanoid score	I2897
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55325
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0005075
OrthoInspector	1	1.000	-	-		oto17272
orthoMCL	1	0.900	-	-		OOG6_102392
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R668
SonicParanoid	1	1.000	-	-		X4115
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.690