Protein Alignment Rpp20 and Parva

DIOPT Version :9

• Sequence 1: NP_001027078.1
• Gene: Rpp20 / 3772007
• FlyBaseID: FBgn0066304
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_065707.2
• Gene: Parva / 57341
• RGDID: 71021
• Length: 372
• Species: Rattus norvegicus
• Alignment Length: 79
• Identity: 16/79 - (20%)
• Similarity: 26/79 - (32%)
• Gaps: 28/79 - (35%)

  Fly    13 PRSAKYHKQQNH------------------RVVRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEE 59
            |||.|::....|                  |...:.|...::    .:.:..|.:...|.|:.:|
  Rat   172 PRSIKWNVDSVHAKNLVAILHLLVALSQYFRAPIRLPDHVSI----QVVVVQKREGILQSRQIQE 232

  Fly    60 LIN------SGAHE 67
            .|.      ||.||
  Rat   233 EITGNTEALSGRHE 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp20	NP_001027078.1	Rpp20	39..132	CDD:289126	9/35 (26%)
Parva	NP_065707.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..44
		Interaction with ARHGAP31. /evidence=ECO:0000250|UniProtKB:Q9EPC1	21..25
		CH	96..197	CDD:278723	5/24 (21%)
		Required for interaction with TESK1 and ILK. /evidence=ECO:0000250|UniProtKB:Q9NVD7	223..372		8/24 (33%)
		CH	263..364	CDD:278723

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3631
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900