Protein Alignment Rpp20 and Y62E10A.24

DIOPT Version :9

• Sequence 1: NP_001027078.1
• Gene: Rpp20 / 3772007
• FlyBaseID: FBgn0066304
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_001379263.1
• Gene: Y62E10A.24 / 36805064
• WormBaseID: WBGene00302968
• Length: 130
• Species: Caenorhabditis elegans
• Alignment Length: 121
• Identity: 40/121 - (33%)
• Similarity: 73/121 - (60%)
• Gaps: 2/121 - (1%)

  Fly    13 PRSAKYHKQQNHRVVRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEELINSGAHEIFLHCMGFSV 77
            |.|.::.::.|.  :|::||....|:.::||||.||:.::|.:..||::|:...|:|:|.||.|:
 Worm     7 PSSKRFDEKTNE--MRRRPPVKPSSNPNHIYITRKTNVESQSKSTEEMLNNAFDEVFIHGMGASI 69

  Fly    78 TRGLNIALRLVQNSDGALSYAINTSTVQLVDELHPLCDAEDITFRQRNNSALHIKI 133
            .:.|..|:.:.:...|::...|.|||||..|::..|.|.:....|.|:.||:|:.:
 Worm    70 NKALVFAMEVERRFGGSVKSDIQTSTVQCTDDIVSLLDLDQSETRHRSVSAVHVHL 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp20	NP_001027078.1	Rpp20	39..132	CDD:289126	33/92 (36%)
Y62E10A.24	NP_001379263.1	Rpp20	29..124	CDD:372048	34/94 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160157459
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	80	1.000	Inparanoid score	I3798
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG48270
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0008044
OrthoInspector	1	1.000	-	-		oto17786
orthoMCL	1	0.900	-	-		OOG6_105961
Panther	1	1.100	-	-	LDO	PTHR15314
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4365
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	10.930