Protein Alignment Rpp20 and Pop7

DIOPT Version :10

• Sequence 1: NP_001027078.1
• Gene: Rpp20 / 3772007
• FlyBaseID: FBgn0066304
• Length: 167
• Species: Drosophila melanogaster
• Sequence 2: NP_001099388.1
• Gene: Pop7 / 288564
• RGDID: 1306413
• Length: 140
• Species: Rattus norvegicus
• Alignment Length: 138
• Identity: 57/138 - (41%)
• Similarity: 82/138 - (59%)
• Gaps: 25/138 - (18%)

  Fly    12 KPRSA--------KY--HKQQNHRVVRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEELINSGAH 66
            :||.|        :|  .|:..||:    |.||     ::||:..|||||||..||::|::.|..
  Rat     6 EPRGAIEAELDPVEYTLRKRLPHRL----PRRP-----NDIYVNMKTDFKAQLARCQKLLDGGTR 61

  Fly    67 ------EIFLHCMGFSVTRGLNIALRLVQNSDGALSYAINTSTVQLVDELHPLCDAEDITFRQRN 125
                  ||::|.:|.::.|.:||||:|...|.|:|..|.|||||:|||||.|..|:.:...|.||
  Rat    62 GQNACTEIYIHGLGLAINRAINIALQLQAGSFGSLQVAANTSTVELVDELEPETDSREPLTRIRN 126

  Fly   126 NSALHIKI 133
            |||:||::
  Rat   127 NSAIHIRV 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp20	NP_001027078.1	Rpp20	42..132	CDD:372048	46/95 (48%)
Pop7	NP_001099388.1	Rpp20	33..133	CDD:372048	48/104 (46%)