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Protein Alignment Rpp20 and pop7
DIOPT Version :9
Sequence 1: | NP_001027078.1 |
Gene: | Rpp20 / 3772007 |
FlyBaseID: | FBgn0066304 |
Length: | 167 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_596508.1 |
Gene: | pop7 / 2541332 |
PomBaseID: | SPBP8B7.01c |
Length: | 102 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 91 |
Identity: | 20/91 - (21%) |
Similarity: | 40/91 - (43%) |
Gaps: | 17/91 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 RHNIYITSKTDFKAQQRRCEELINSGAHEIFLHCMGFSVTRGLNIALRLVQNSD----GALSYAI 99
|..|.|..||...|..||..:.::... .|.....|.::. .||:.|| ...:.::
pombe 13 RKGIIIRRKTHLIAMIRRMRKKLDIDG-SILYQATGMAIP-------HLVELSDKYKRQGYNISM 69
Fly 100 NTSTVQLVDELHPLCDAEDITFRQRN 125
:|:||:.:||: .::::.:.:|
pombe 70 DTATVEFMDEI-----VDEVSIQNKN 90
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rpp20 | NP_001027078.1 |
Rpp20 |
39..132 |
CDD:289126 |
20/91 (22%) |
pop7 | NP_596508.1 |
Rpp20 |
11..99 |
CDD:289126 |
20/91 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15314 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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