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Protein Alignment Rpp20 and pop7
DIOPT Version :10
| Sequence 1: | NP_001027078.1 |
Gene: | Rpp20 / 3772007 |
FlyBaseID: | FBgn0066304 |
Length: | 167 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001006004.1 |
Gene: | pop7 / 100004610 |
ZFINID: | ZDB-GENE-041010-88 |
Length: | 148 |
Species: | Danio rerio |
| Alignment Length: | 110 |
Identity: | 52/110 - (47%) |
| Similarity: | 76/110 - (69%) |
Gaps: | 5/110 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 VRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEELINSGAH-EIFLHCMGFSVTRGLNIALRLVQN 90
:||:.||.....|:::|:..|||||||..||::|:: || ||.:|.:|.::.|.:||||:|..:
Zfish 36 LRKRLPRKLPKRRNDVYVNMKTDFKAQLARCQKLLD--AHREICIHGLGLAINRAINIALQLQTS 98
Fly 91 SDGALSYAINTSTVQLVDELHP--LCDAEDITFRQRNNSALHIKI 133
|.|||..|.|||||:|:|:|.| ..:|.:...|.|||||:|||:
Zfish 99 SQGALQLAANTSTVELIDDLEPEDPDEAGEHLTRTRNNSAIHIKV 143
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rpp20 | NP_001027078.1 |
Rpp20 |
42..132 |
CDD:372048 |
45/92 (49%) |
| pop7 | NP_001006004.1 |
Rpp20 |
46..142 |
CDD:372048 |
46/97 (47%) |
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