DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG33843 and H1f0

DIOPT Version :10

Sequence 1:NP_001027349.1 Gene:His1:CG33843 / 3772004 FlyBaseID:FBgn0053843 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_036710.1 Gene:H1f0 / 24437 RGDID:2777 Length:194 Species:Rattus norvegicus


Alignment Length:246 Identity:91/246 - (36%)
Similarity:116/246 - (47%) Gaps:62/246 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |::::.:|   |.|.|                  .:||.|..:..||....|:.|:|:..|.|.|
  Rat     1 MTENSTST---PAAKP------------------KRAKAAKKSTDHPKYSDMIVAAIQAEKNRAG 44

  Fly    66 SSLLAIKKYITATYK----CDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKD 126
            ||..:|:|||.:.||    .|:|     ||..:|..|..|.|.||||.||||||:|:    |..:
  Rat    45 SSRQSIQKYIKSHYKVGENADSQ-----IKLSIKRLVTTGVLKQTKGVGASGSFRLA----KGDE 100

  Fly   127 PKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKA---KKAVATKKTAENKKTEKAKA 188
            ||........:|:|  ||||:.|.....||.|..|..|||||   |||         ||...|..
  Rat   101 PKRSVAFKKTKKEV--KKVATPKKAAKPKKAASKAPSKKPKATPVKKA---------KKKPAATP 154

  Fly   189 KDAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKPAVSAKPKKTVKKAS 239
            |.|||..|:|.||      |.|:|||       |||| |..|.|.:.|:||
  Rat   155 KKAKKPKIVKVKP------VKASKPK-------KAKP-VKPKAKSSAKRAS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG33843NP_001027349.1 H15 43..130 CDD:238028 38/90 (42%)
H1f0NP_036710.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 8/45 (18%)
H15 22..106 CDD:238028 38/92 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..194 56/135 (41%)

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