DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13559 and CG42566

DIOPT Version :9

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001097421.2 Gene:CG42566 / 8674120 FlyBaseID:FBgn0260768 Length:77 Species:Drosophila melanogaster


Alignment Length:68 Identity:19/68 - (27%)
Similarity:31/68 - (45%) Gaps:9/68 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMICPMCHDEIETTTKIRRRWIAYVASGIVLFTTCGIGCWLIPCILDCF----NEIHHSCPVCKA 100
            :::||.|..::  ||::..:  |...:.::....|....|...|.|.|.    |..|| ||.|.|
  Fly    11 IVVCPSCRQQV--TTRVEPK--ATTKTHLIALIMCLTFLWPCACCLYCTQCARNSDHH-CPSCNA 70

  Fly   101 TLG 103
            .:|
  Fly    71 YIG 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 19/68 (28%)
CG42566NP_001097421.2 zf-LITAF-like 8..76 CDD:287559 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D155863at50557
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23292
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.110

Return to query results.
Submit another query.