DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and Litaf

DIOPT Version :9

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_064364.1 Gene:Litaf / 56722 MGIID:1929512 Length:161 Species:Mus musculus


Alignment Length:142 Identity:32/142 - (22%)
Similarity:48/142 - (33%) Gaps:45/142 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VPSTPPPSYEEAMGWET--------------------------RRSHSTTWLLAENTSSL----- 40
            |..|.||:|||.:|..:                          ..|:.|..:...|.:::     
Mouse    15 VVPTAPPTYEETVGVNSYYPTPPAPMPGPATGLITGPDGKGMNPPSYYTQPVPVPNANAIAVQTV 79

  Fly    41 --------------MICPMCHDEIETTTKIRRRWIAYVASGIVLFTTCGIGCWLIPCILDCFNEI 91
                          |.||.|...|.|........:.:::.|.:....|..||..||..:|...::
Mouse    80 YVQQPVSFYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDV 144

  Fly    92 HHSCPVCKATLG 103
            .|.||.|||.||
Mouse   145 DHYCPNCKALLG 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 21/85 (25%)
LitafNP_064364.1 PPxY motif 20..23 2/2 (100%)
zf-LITAF-like 91..159 CDD:371158 21/66 (32%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 4/22 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 1 1.000 - - mtm11118
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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