DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and litaf

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001002184.1 Gene:litaf / 431731 ZFINID:ZDB-GENE-040704-23 Length:163 Species:Danio rerio


Alignment Length:152 Identity:32/152 - (21%)
Similarity:50/152 - (32%) Gaps:51/152 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSFARVPSTPPPSYEEAMGWE--------------------------------TRRSHSTT--- 30
            |.:...|...|||||:|..|..                                |.:....|   
Zfish    11 MENTTLVGHPPPPSYDEISGANPYYPAGPYPPADMKASGPPPYPTQEYNQMYPPTAQGQPVTSPV 75

  Fly    31 ----------WLLAENTSSLMICPMCHDEIETTTKIRRR---WIAYVASGIVLFTTCGIGCWLIP 82
                      .|:..|......||:|...:.|..:....   |::  .:|:.:| .|..||.|||
Zfish    76 VAVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLS--CAGLAVF-GCIYGCCLIP 137

  Fly    83 CILDCFNEIHHSCPVCKATLGI 104
            ..::...::.|.||.|.:.||:
Zfish   138 FCIEDLKDVTHHCPNCSSVLGV 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 19/70 (27%)
litafNP_001002184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 3/11 (27%)
PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 22..25 2/2 (100%)
zf-LITAF-like 93..161 CDD:463165 19/70 (27%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 116..136 6/22 (27%)

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