DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and litaf

DIOPT Version :9

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001002184.1 Gene:litaf / 431731 ZFINID:ZDB-GENE-040704-23 Length:163 Species:Danio rerio


Alignment Length:152 Identity:32/152 - (21%)
Similarity:50/152 - (32%) Gaps:51/152 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSFARVPSTPPPSYEEAMGWE--------------------------------TRRSHSTT--- 30
            |.:...|...|||||:|..|..                                |.:....|   
Zfish    11 MENTTLVGHPPPPSYDEISGANPYYPAGPYPPADMKASGPPPYPTQEYNQMYPPTAQGQPVTSPV 75

  Fly    31 ----------WLLAENTSSLMICPMCHDEIETTTKIRRR---WIAYVASGIVLFTTCGIGCWLIP 82
                      .|:..|......||:|...:.|..:....   |::  .:|:.:| .|..||.|||
Zfish    76 VAVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLS--CAGLAVF-GCIYGCCLIP 137

  Fly    83 CILDCFNEIHHSCPVCKATLGI 104
            ..::...::.|.||.|.:.||:
Zfish   138 FCIEDLKDVTHHCPNCSSVLGV 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 19/70 (27%)
litafNP_001002184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 3/11 (27%)
PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 22..25 2/2 (100%)
zf-LITAF-like 93..161 CDD:287559 19/70 (27%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 116..136 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 1 1.000 - - mtm6622
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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