DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and litaf

DIOPT Version :9

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_988970.1 Gene:litaf / 394567 XenbaseID:XB-GENE-1017030 Length:148 Species:Xenopus tropicalis


Alignment Length:129 Identity:33/129 - (25%)
Similarity:51/129 - (39%) Gaps:33/129 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VPSTPPPSYEEA-----------MGWETRRSHSTTWLL---------------AENTSSL----- 40
            |||. |||||||           .|.:.:...:..:::               .:...:|     
 Frog    16 VPSA-PPSYEEATFHHPPYPPLHQGMDAKNMSNPPYIVQPVPMQPPVTVQTVYVQQAMTLYDRPV 79

  Fly    41 -MICPMCHDEIETTTKIRRRWIAYVASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKATLG 103
             |.|..|:..|.|..:.....:|:::.|.:....|..||.|||..:|...::.|.||.|.|.||
 Frog    80 QMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLG 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 22/72 (31%)
litafNP_988970.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23 2/2 (100%)
zf-LITAF-like 78..146 CDD:371158 21/66 (32%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 101..123 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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