DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and CG30269

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_611704.2 Gene:CG30269 / 37600 FlyBaseID:FBgn0050269 Length:144 Species:Drosophila melanogaster


Alignment Length:124 Identity:30/124 - (24%)
Similarity:39/124 - (31%) Gaps:49/124 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPSYEEAMGWETRRSHSTTWLLAENTSSLMI---------------------------CPMCHDE 49
            ||||::|           |...||.|....:                           ||.||:.
  Fly    33 PPSYDQA-----------TTTPAETTGPAPVPASTSTTQHTVVVVPGSPYGPEPMDVQCPYCHNY 86

  Fly    50 IETTTKI----RRRWIAYVASGIVLFTTCGIGCWLIP-CILDCFNEIHHSCPVCKATLG 103
            ..|....    |...||.:.....|:  |   |..:| ||..|.| .:|.|.:|...||
  Fly    87 ARTRVSFKPNSRTHLIALILCLFQLY--C---CVCLPYCISSCMN-TNHYCGMCDRYLG 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 21/98 (21%)
CG30269NP_611704.2 PTZ00144 <6..>63 CDD:240289 9/40 (23%)
zf-LITAF-like 73..142 CDD:463165 21/73 (29%)

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