DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13559 and CG4250

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster


Alignment Length:129 Identity:31/129 - (24%)
Similarity:42/129 - (32%) Gaps:43/129 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSTP----PPSYEEAMGWETRRSHSTTWLL--AENTS------------------SLMICPMC-- 46
            |..|    ||||:.|......:.|....::  .|||.                  |:..||.|  
  Fly    12 PQAPGFQAPPSYDSAPQQVYPQLHQGQGVILQGENTENYESIGNNAPPNVLGQCPSVATCPSCGV 76

  Fly    47 ----HDEIETTTKIRRRWIAYVASGIVLFTTC---GIGCWLIPCILDCFNEIHHSCPVCKATLG 103
                ..|.|.:||          :.::....|   ||.|..||...|......|:|..|.|.:|
  Fly    77 RRETKVEFEPSTK----------THLLALLICMLGGICCCCIPYCTDSCQSAKHTCTSCGAYVG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 20/93 (22%)
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 20/75 (27%)

Return to query results.
Submit another query.