DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13559 and CG42565

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster


Alignment Length:137 Identity:31/137 - (22%)
Similarity:43/137 - (31%) Gaps:38/137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSFARVPSTPP--------PSYEEAMGWETRR-----------------------SHSTTWLLA 34
            |..:.||.|.||        |..|:.|......                       .|..|.:|.
  Fly     1 MRCYKRVDSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLV 65

  Fly    35 ENTSSLMICPMCHDEIETTTKIRRRWIAYVASGIVLFTTCGIGCW---LIPCILDCFNEIHHSCP 96
            :||....|||.|:..|....:.......|..:.::    |...||   ..||..:|..:....||
  Fly    66 DNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALL----CLFLCWPCVCAPCCCNCCYKTSQYCP 126

  Fly    97 VCKATLG 103
            .|.:.||
  Fly   127 NCNSCLG 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 17/69 (25%)
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 18/70 (26%)

Return to query results.
Submit another query.