DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13559 and Cdip1

DIOPT Version :9

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001008361.1 Gene:Cdip1 / 360480 RGDID:1310686 Length:208 Species:Rattus norvegicus


Alignment Length:105 Identity:29/105 - (27%)
Similarity:44/105 - (41%) Gaps:21/105 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PPPSYEEAMGWETRRSHSTTWLLAENTSSLM---------------ICPMCHDEIETTTKIRRRW 60
            ||.||....|      |:.|.|:....::.:               :||.|...|.|........
  Rat   101 PPGSYPGPGG------HTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGL 159

  Fly    61 IAYVASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKA 100
            :.:|......|..|.:||.||||:::.|.::.|:||.|||
  Rat   160 MNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 21/78 (27%)
Cdip1NP_001008361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70
zf-LITAF-like 137..205 CDD:402300 21/63 (33%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 164..184 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9086
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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