DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13559 and F36G3.3

DIOPT Version :10

Sequence 1:NP_611801.1 Gene:CG13559 / 37720 FlyBaseID:FBgn0034870 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001024633.2 Gene:F36G3.3 / 3565543 WormBaseID:WBGene00009484 Length:148 Species:Caenorhabditis elegans


Alignment Length:118 Identity:35/118 - (29%)
Similarity:52/118 - (44%) Gaps:30/118 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 STPPPSYEEAMGWE-----------TRRS----HSTTWLLAENTSSLMICPMCHDEIETTTKI-- 56
            :.||..|.:..|:|           |..|    .||..:..|..::.:.||.|..:|.|.||.  
 Worm    35 TAPPYHYHDNGGFENVVDVNSPVYTTLASGPMPTSTIIIRLEPHATKLQCPYCRMDIVTRTKSVY 99

  Fly    57 -RRRWIAYVASGIVLFTTCGIGCW---LIP-CILDCFNEIHHSCPVCKATLGI 104
             ...||.:.|  :.||     |||   .:| |:..| .:|.|:||.|:|.:|:
 Worm   100 GLLTWIFFAA--LFLF-----GCWCCCFLPFCLRSC-KDIIHTCPNCRAMIGV 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13559NP_611801.1 LITAF 38..107 CDD:197841 25/74 (34%)
F36G3.3NP_001024633.2 zf-LITAF-like 77..146 CDD:463165 25/76 (33%)

Return to query results.
Submit another query.